WARNING: Raw 1D and 2D data from TReNDS is too large for the server. Run points 1-3 with own data only.

1. Run join_FIDS.py script to combine 2D FIDs 2-NUS-points-fragments (from TReNDS) into one FID.

2. Set up mddnmr processing scripts in joint_2D.proc (already done in the exampe data)

3. In folder with 1D data obtained using TReNDS: 

a. to process data (Fourier transform into spectra) run:
      ./process_all.sh

b. to extract peak positions from 1D spectra run MATLAB script chem_shift_comp.m it will create joint_2D.proc/ind.mat;


4. In folder joint_2D.proc run proc_all_frames.sh script (all scripts can be prepared by qMDD GUI from mddnmr package)

